2ERZ Transferase date Oct 25, 2005
title Crystal Structure Of C-Amp Dependent Kinase (Pka) Bound To Hydroxyfasudil
authors M.Jacobs
compound source
Molecule: Camp-Dependent Protein Kinase, Alpha-Catalytic Su
Chain: E
Synonym: Pka C-Alpha
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Prkaca, Pkaca
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Camp-Dependent Protein Kinase Inhibitor, Alpha Fo
Chain: I
Fragment: Residues 5-24
Synonym: Pki-Alpha, Camp- Dependent Protein Kinase Inhibito Musclebrain Isoform;
Engineered: Yes

Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Oryctolagu Cuniculus (Rabbit)
symmetry Space Group: P 21 21 21
R_factor 0.223 R_Free 0.287
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.794 75.751 80.048 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand HFS, SEP, TPO BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
E


I


Primary referenceThe structure of dimeric rock 1 reveals the mechanism for ligand selectivity., Jacobs MD, Hayakawa K, Swenson L, Bellon SF, Fleming M, Taslimi P, Doran J, J Biol Chem 2005 Oct 24;. PMID:16249185
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (2erz.pdb1.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 2ERZ
  • CSU: Contacts of Structural Units for 2ERZ
  • Likely Quarternary Molecular Structure file(s) for 2ERZ
  • Structure Factors (289 Kb)
  • Retrieve 2ERZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ERZ from S2C, [Save to disk]
  • Re-refined 2erz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ERZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ERZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ERZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2erz_I] [2erz_E] [2erz]
  • SWISS-PROT database: [P61926] [P05132]
  • Domain organization of [IPKA_RABIT] [KAPCA_MOUSE] by SWISSPFAM
  • Domains found in 2ERZ: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 2ERZ
  • Community annotation for 2ERZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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