2EUL Transcription date Oct 28, 2005
title Structure Of The Transcription Factor Gfh1.
authors J.Symersky, A.Perederina, M.N.Vassylyeva, V.Svetlov, I.Artsimovi D.G.Vassylyev, Riken Structural Genomicsproteomics Initiati
compound source
Molecule: Anti-Cleavage Anti-Grea Transcription Factor Gfh1
Chain: A, B, C, D
Engineered: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 300852
Strain: Hb8
Gene: Gfhi
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(Lambdade3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pvs26
symmetry Space Group: P 43
R_factor 0.206 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.291 59.291 218.876 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceRegulation through the RNA Polymerase Secondary Channel: STRUCTURAL AND FUNCTIONAL VARIABILITY OF THE COILED-COIL TRANSCRIPTION FACTORS., Symersky J, Perederina A, Vassylyeva MN, Svetlov V, Artsimovitch I, Vassylyev DG, J Biol Chem. 2006 Jan 20;281(3):1309-12. Epub 2005 Nov 18. PMID:16298991
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (2eul.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (2eul.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (2eul.pdb3.gz) 105 Kb
  • Biological Unit Coordinates (2eul.pdb4.gz) 105 Kb
  • Biological Unit Coordinates (2eul.pdb5.gz) 106 Kb
  • Biological Unit Coordinates (2eul.pdb6.gz) 106 Kb
  • Biological Unit Coordinates (2eul.pdb7.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 2EUL
  • CSU: Contacts of Structural Units for 2EUL
  • Likely Quarternary Molecular Structure file(s) for 2EUL
  • Structure Factors (358 Kb)
  • Retrieve 2EUL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EUL from S2C, [Save to disk]
  • Re-refined 2eul structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2EUL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EUL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EUL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2eul_A] [2eul_D] [2eul_C] [2eul] [2eul_B]
  • SWISS-PROT database: [Q5SJG6]
  • Domain organization of [Q5SJG6_THET8] by SWISSPFAM
  • Other resources with information on 2EUL
  • Community annotation for 2EUL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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