2F7T Dna Binding Protein date Dec 01, 2005
title Crystal Structure Of The Catalytic Domain Of Mos1 Mariner Tr
authors J.M.Richardson, A.Dawson, P.Taylor, D.J.Finnegan, M.D.Walkinshaw
compound source
Molecule: Mos1 Transposase
Chain: A
Fragment: Catalytic Domain
Engineered: Yes
Mutation: Yes
Organism_scientific: Drosophila Mauritiana
Organism_taxid: 7226
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3), B834(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbcp378
symmetry Space Group: P 41 21 2
R_factor 0.189 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.243 44.243 206.047 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand MG enzyme
Primary referenceMechanism of Mos1 transposition: insights from structural analysis., Richardson JM, Dawson A, O'hagan N, Taylor P, Finnegan DJ, Walkinshaw MD, EMBO J. 2006 Mar 22;25(6):1324-34. Epub 2006 Mar 2. PMID:16511570
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (2f7t.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 2F7T
  • CSU: Contacts of Structural Units for 2F7T
  • Likely Quarternary Molecular Structure file(s) for 2F7T
  • Structure Factors (151 Kb)
  • Retrieve 2F7T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F7T from S2C, [Save to disk]
  • Re-refined 2f7t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2F7T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2F7T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2F7T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f7t] [2f7t_A]
  • SWISS-PROT database: [O61446]
  • Domain organization of [O61446_DROSE] by SWISSPFAM
  • Other resources with information on 2F7T
  • Community annotation for 2F7T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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