2FGK Transport Protein date Dec 22, 2005
title Crystal Structure Of The Abc-Cassette E631q Mutant Of Hlyb W Atp
authors J.Zaitseva, C.Oswald, T.Jumpertz, S.Jenewein, I.B.Holland, L.Schm
compound source
Molecule: Alpha-Hemolysin Translocation Atp-Binding Protein
Chain: A, B, C, D
Fragment: Amino Acids 467-707
Engineered: Yes
Mutation: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Hlyb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5 Alpha
symmetry Space Group: P 1 21 1
R_factor 0.223 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.142 189.256 63.475 90.00 111.87 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand ATP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceA structural analysis of asymmetry required for catalytic activity of an ABC-ATPase domain dimer., Zaitseva J, Oswald C, Jumpertz T, Jenewein S, Wiedenmann A, Holland IB, Schmitt L, EMBO J. 2006 Jul 26;25(14):3432-43. Epub 2006 Jul 6. PMID:16858415
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (2fgk.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (2fgk.pdb2.gz) 40 Kb
  • Biological Unit Coordinates (2fgk.pdb3.gz) 40 Kb
  • Biological Unit Coordinates (2fgk.pdb4.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 2FGK
  • CSU: Contacts of Structural Units for 2FGK
  • Likely Quarternary Molecular Structure file(s) for 2FGK
  • Structure Factors (422 Kb)
  • Retrieve 2FGK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FGK from S2C, [Save to disk]
  • Re-refined 2fgk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2FGK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FGK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FGK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fgk_B] [2fgk] [2fgk_D] [2fgk_A] [2fgk_C]
  • SWISS-PROT database: [P08716]
  • Belongs to the atp-binding cassette (abc) superfamily according to TCDB.
  • Domain organization of [HLYBP_ECOLX] by SWISSPFAM
  • Domain found in 2FGK: [AAA ] by SMART
    • Other resources with information on 2FGK
  • Community annotation for 2FGK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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