2G24 Hydrolase date Feb 15, 2006
title Ketopiperazine-Based Renin Inhibitors: Optimization Of The "C" Ring
authors D.D.Holsworth, M.Jalaiea, E.Zhanga, P.Mcconnella
compound source
Molecule: Renin
Chain: A, B
Synonym: Angiotensinogenase
Ec: 3.4.23.15
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ren
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 3
R_factor 0.240 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
140.885 140.885 140.885 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand 7IG BindingDB enzyme Hydrolase E.C.3.4.23.15 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceKetopiperazine-based renin inhibitors: optimization of the "C" ring., Holsworth DD, Cai C, Cheng XM, Cody WL, Downing DM, Erasga N, Lee C, Powell NA, Edmunds JJ, Stier M, Jalaie M, Zhang E, McConnell P, Ryan MJ, Bryant J, Li T, Kasani A, Hall E, Subedi R, Rahim M, Maiti S, Bioorg Med Chem Lett. 2006 May 1;16(9):2500-4. Epub 2006 Feb 15. PMID:16480874
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (2g24.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (2g24.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (2g24.pdb3.gz) 312 Kb
  • Biological Unit Coordinates (2g24.pdb4.gz) 157 Kb
  • LPC: Ligand-Protein Contacts for 2G24
  • CSU: Contacts of Structural Units for 2G24
  • Likely Quarternary Molecular Structure file(s) for 2G24
  • Structure Factors (581 Kb)
  • Retrieve 2G24 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G24 from S2C, [Save to disk]
  • Re-refined 2g24 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2G24 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2G24
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2G24, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g24] [2g24_A] [2g24_B]
  • SWISS-PROT database: [P00797]
  • Domain organization of [RENI_HUMAN] by SWISSPFAM
    • Other resources with information on 2G24
  • Community annotation for 2G24 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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