2G4W Hydrolase date Feb 22, 2006
title Anomalous Substructure Of Ribonuclease A (C2)
authors C.Mueller-Dieckmann, M.S.Weiss
compound source
Molecule: Ribonuclease Pancreatic
Chain: A, B
Synonym: Rnase 1, Rnase A
Ec: 3.1.27.5
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: C 1 2 1
R_factor 0.213 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.120 32.600 72.470 90.00 90.56 90.00
method X-Ray Diffractionresolution 1.84 Å
ligand CL, SO4 enzyme Hydrolase E.C.3.1.27.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • ribonuclease A activity


  • Primary referenceOn the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths., Mueller-Dieckmann C, Panjikar S, Schmidt A, Mueller S, Kuper J, Geerlof A, Wilmanns M, Singh RK, Tucker PA, Weiss MS, Acta Crystallogr D Biol Crystallogr. 2007 Mar;63(Pt 3):366-80. Epub 2007, Feb 21. PMID:17327674
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2g4w.pdb1.gz) 21 Kb
  • Biological Unit Coordinates (2g4w.pdb2.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 2G4W
  • CSU: Contacts of Structural Units for 2G4W
  • Likely Quarternary Molecular Structure file(s) for 2G4W
  • Structure Factors (223 Kb)
  • Retrieve 2G4W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G4W from S2C, [Save to disk]
  • Re-refined 2g4w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2G4W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2G4W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2G4W, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g4w_B] [2g4w_A] [2g4w]
  • SWISS-PROT database: [P61823]
  • Domain organization of [RNAS1_BOVIN] by SWISSPFAM
  • Domain found in 2G4W: [RNAse_Pc ] by SMART
  • Other resources with information on 2G4W
  • Community annotation for 2G4W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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