2G6F	Signaling Protein	date	Feb 24, 2006
title	Crystal Structure Of The Sh3 Domain Of Betapix In Complex Wi Affinity Peptide From Pak2
authors	A.Hoelz
compound		source
Molecule: Rho Guanine Nucleotide Exchange Factor 7 Chain: X Fragment: Sh3 Domain(Residues 10-63) Synonym: Pak-Interacting Exchange Factor Beta, Beta-Pix Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Gene: Arhgef7, Pak3bp, Pixb Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p1
symmetry	Space Group: P 21 21 2	R_factor 0.184 R_Free 0.199
crystal cell	length a length b length c angle alpha angle beta angle gamma 73.377 31.427 28.171 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	0.92 Å
ligand	NCO	enzyme
Primary reference	Crystal Structure of the SH3 Domain of betaPIX in Complex with a High Affinity Peptide from PAK2., Hoelz A, Janz JM, Lawrie SD, Corwin B, Lee A, Sakmar TP, J Mol Biol. 2006 Feb 28;. PMID:16527308

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (2g6f.pdb1.gz) 44 Kb LPC: Ligand-Protein Contacts for 2G6F CSU: Contacts of Structural Units for 2G6F Likely Quarternary Molecular Structure file(s) for 2G6F Structure Factors (271 Kb) Retrieve 2G6F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2G6F from S2C, [Save to disk] Re-refined 2g6f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2G6F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2G6F

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2G6F, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2g6f_X] [2g6f] SWISS-PROT database: [O55043] Domain organization of [ARHG7_RAT] by SWISSPFAM Domain found in 2G6F: [SH3 ] by SMART

Other resources with information on 2G6F

Community annotation for 2G6F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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