2GGQ Transferase date Mar 24, 2006
title Complex Of Hypothetical Glucose-1-Phosphate Thymidylyltransf Sulfolobus Tokodaii
authors V.Rajakannan, T.Mizushima, A.Suzuki, R.Masui, S.Kuramitsu, T.Yama
compound source
Molecule: 401aa Long Hypothetical Glucose-1-Phosphate Thymidylyltransferase;
Chain: A
Ec: 2.7.7.24
Engineered: Yes
Organism_scientific: Sulfolobus Tokodaii
Organism_taxid: 111955
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: H 3
R_factor 0.191 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
122.750 122.750 95.518 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand IOD, TTP enzyme Transferase E.C.2.7.7.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2ggq.pdb1.gz) 67 Kb
  • Biological Unit Coordinates (2ggq.pdb2.gz) 197 Kb
  • LPC: Ligand-Protein Contacts for 2GGQ
  • CSU: Contacts of Structural Units for 2GGQ
  • Likely Quarternary Molecular Structure file(s) for 2GGQ
  • Structure Factors (552 Kb)
  • Retrieve 2GGQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GGQ from S2C, [Save to disk]
  • Re-refined 2ggq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GGQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GGQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GGQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ggq_A] [2ggq]
  • SWISS-PROT database: [Q975F9]
  • Domain organization of [Q975F9_SULTO] by SWISSPFAM
  • Other resources with information on 2GGQ
  • Community annotation for 2GGQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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