2GUZ Chaperone, Protein Transport date May 02, 2006
title Structure Of The Tim14-Tim16 Complex Of The Mitochondrial Pr Import Motor
authors D.Mokranjac, G.Bourenkov, K.Hell, W.Neupert, M.Groll
compound source
Molecule: Mitochondrial Import Inner Membrane Translocase S Tim14;
Chain: A, C, E, G, I, K, M, O
Fragment: J-Domain
Synonym: Presequence Translocated-Associated Motor Subunit
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Pam18, Tim14
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Mitochondrial Import Inner Membrane Translocase S Tim16;
Chain: B, D, F, H, J, L, N, P
Fragment: J-Like Domain
Synonym: Presequence Translocated-Associated Motor Subunit
Engineered: Yes

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Pam16, Tim16
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.205 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
111.591 114.441 162.191 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand FLC enzyme
Gene
Ontology
ChainFunctionProcessComponent
H, F, J, N, D, P, L, B


Primary referenceStructure and function of Tim14 and Tim16, the J and J-like components of the mitochondrial protein import motor., Mokranjac D, Bourenkov G, Hell K, Neupert W, Groll M, EMBO J. 2006 Oct 4;25(19):4675-85. Epub 2006 Sep 14. PMID:16977310
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk]
  • Biological Unit Coordinates (2guz.pdb1.gz) 26 Kb
  • Biological Unit Coordinates (2guz.pdb2.gz) 26 Kb
  • Biological Unit Coordinates (2guz.pdb3.gz) 27 Kb
  • Biological Unit Coordinates (2guz.pdb4.gz) 26 Kb
  • Biological Unit Coordinates (2guz.pdb5.gz) 26 Kb
  • Biological Unit Coordinates (2guz.pdb6.gz) 26 Kb
  • Biological Unit Coordinates (2guz.pdb7.gz) 26 Kb
  • Biological Unit Coordinates (2guz.pdb8.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 2GUZ
  • CSU: Contacts of Structural Units for 2GUZ
  • Likely Quarternary Molecular Structure file(s) for 2GUZ
  • Structure Factors (2083 Kb)
  • Retrieve 2GUZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GUZ from S2C, [Save to disk]
  • Re-refined 2guz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GUZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GUZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GUZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2guz_I] [2guz_D] [2guz_K] [2guz_N] [2guz_O] [2guz_E] [2guz_G] [2guz_M] [2guz_F] [2guz] [2guz_L] [2guz_J] [2guz_P] [2guz_A] [2guz_C] [2guz_B] [2guz_H]
  • SWISS-PROT database: [Q07914] [P42949]
  • Belongs to the mitochondrial protein translocase (mpt) family according to TCDB.
  • Domain organization of [TIM14_YEAST] [TIM16_YEAST] by SWISSPFAM
  • Domain found in 2GUZ: [DnaJ ] by SMART
  • Other resources with information on 2GUZ
  • Community annotation for 2GUZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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