2GW1 Protein Transport date May 03, 2006
title Crystal Structure Of The Yeast Tom70
authors Y.Wu, B.Sha
compound source
Molecule: Mitochondrial Precursor Proteins Import Receptor
Chain: A, B
Fragment: Cytosolic Fragment
Synonym: 70 Kda Mitochondrial Outer Membrane Protein, Trans Outer Membrane Tom70;
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Tom70, Mas70, Omp1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.259 R_Free 0.316
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.880 168.597 82.987 90.00 102.59 90.00
method X-Ray Diffractionresolution 3.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of yeast mitochondrial outer membrane translocon member Tom70p., Wu Y, Sha B, Nat Struct Mol Biol. 2006 Jun 11;. PMID:16767096
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • Biological Unit Coordinates (2gw1.pdb1.gz) 161 Kb
  • CSU: Contacts of Structural Units for 2GW1
  • Likely Quarternary Molecular Structure file(s) for 2GW1
  • Structure Factors (195 Kb)
  • Retrieve 2GW1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GW1 from S2C, [Save to disk]
  • Re-refined 2gw1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GW1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GW1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GW1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gw1] [2gw1_B] [2gw1_A]
  • SWISS-PROT database: [P07213]
  • Belongs to the mitochondrial protein translocase (mpt) family according to TCDB.
  • Domain organization of [TOM70_YEAST] by SWISSPFAM
  • Domain found in 2GW1: [TPR ] by SMART
  • Other resources with information on 2GW1
  • Community annotation for 2GW1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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