2H1C Gene Regulation date May 16, 2006
title Crystal Structure Of Fitacb From Neisseria Gonorrhoeae
authors K.Mattison, J.S.Wilbur, M.So, R.G.Brennan
compound source
Molecule: Trafficking Protein B
Chain: A
Engineered: Yes
Organism_scientific: Neisseria Gonorrhoeae
Organism_taxid: 485
Gene: Fitb
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Pet

Molecule: Trafficking Protein A
Chain: B
Fragment: Residues: 46-64
Engineered: Yes

Organism_scientific: Neisseria Gonorrhoeae
Organism_taxid: 485
Gene: Fita
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.191 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.970 50.700 48.280 90.00 118.55 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACT, MG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • nuclease activity
  • ribonuclease activity


  • Primary referenceStructure of FitAB from Neisseria gonorrhoeae bound to DNA reveals a tetramer of toxin-antitoxin heterodimers containing pin domains and ribbon-helix-helix motifs., Mattison K, Wilbur JS, So M, Brennan RG, J Biol Chem. 2006 Dec 8;281(49):37942-51. Epub 2006 Sep 18. PMID:16982615
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (2h1c.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (2h1c.pdb2.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 2H1C
  • CSU: Contacts of Structural Units for 2H1C
  • Likely Quarternary Molecular Structure file(s) for 2H1C
  • Structure Factors (107 Kb)
  • Retrieve 2H1C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2H1C from S2C, [Save to disk]
  • Re-refined 2h1c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2H1C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2H1C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2H1C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2h1c] [2h1c_B] [2h1c_A]
  • SWISS-PROT database: [Q51070] [Q9RF92]
  • Domain organization of [Q51070_NEIGO] [Q9RF92_NEIGO] by SWISSPFAM
  • Other resources with information on 2H1C
  • Community annotation for 2H1C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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