2HCU Lyase date Jun 19, 2006
title Crystal Structure Of Smu.1381 (Or Leud) From Streptococcus M
authors Z.Q.Gao, H.F.Hou, L.F.Li, Y.H.Liang, X.D.Su, Y.H.Dong
compound source
Molecule: 3-Isopropylmalate Dehydratase Small Subunit
Chain: A
Synonym: Isopropylmalate Isomerase, Alpha-Ipm Isomerase, Ip
Ec: 4.2.1.33
Engineered: Yes
Organism_scientific: Streptococcus Mutans
Organism_taxid: 1309
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a
symmetry Space Group: P 65
R_factor 0.188 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
74.033 74.033 82.519 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand SO4 enzyme Lyase E.C.4.2.1.33 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (2hcu.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 2HCU
  • CSU: Contacts of Structural Units for 2HCU
  • Likely Quarternary Molecular Structure file(s) for 2HCU
  • Structure Factors (105 Kb)
  • Retrieve 2HCU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HCU from S2C, [Save to disk]
  • Re-refined 2hcu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HCU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HCU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HCU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hcu] [2hcu_A]
  • SWISS-PROT database: [Q8DTG5]
  • Domain organization of [LEUD_STRMU] by SWISSPFAM
  • Other resources with information on 2HCU
  • Community annotation for 2HCU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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