2HNK Transferase date Jul 13, 2006
title Crystal Structure Of Sam-Dependent O-Methyltransferase From Bacterium Leptospira Interrogans
authors X.Hou, Z.Wei, W.Gong
compound source
Molecule: Sam-Dependent O-Methyltransferase
Chain: A, B, C
Engineered: Yes
Organism_scientific: Leptospira Interrogans
Organism_taxid: 173
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 2 2 21
R_factor 0.213 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
157.810 60.331 138.232 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand PEG, SAH, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceCrystal structure of SAM-dependent O-methyltransferase from pathogenic bacterium Leptospira interrogans., Hou X, Wang Y, Zhou Z, Bao S, Lin Y, Gong W, J Struct Biol. 2007 Apr 30;. PMID:17561415
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (123 Kb) [Save to disk]
  • Biological Unit Coordinates (2hnk.pdb1.gz) 80 Kb
  • Biological Unit Coordinates (2hnk.pdb2.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 2HNK
  • CSU: Contacts of Structural Units for 2HNK
  • Likely Quarternary Molecular Structure file(s) for 2HNK
  • Structure Factors (352 Kb)
  • Retrieve 2HNK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HNK from S2C, [Save to disk]
  • Re-refined 2hnk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HNK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HNK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HNK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hnk_C] [2hnk_B] [2hnk_A] [2hnk]
  • SWISS-PROT database: [Q8F8Y3]
  • Domain organization of [Q8F8Y3_LEPIN] by SWISSPFAM
  • Other resources with information on 2HNK
  • Community annotation for 2HNK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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