2HPW Luminescent Protein date Jul 17, 2006
title Green Fluorescent Protein From Clytia Gregaria
authors G.Stepanyuk, Z.J.Liu, S.E.Vysotski, J.Lee, J.P.Rose, B.C.Wang, Sou Collaboratory For Structural Genomics (Secsg)
compound source
Molecule: Green Fluorescent Protein
Chain: A
Engineered: Yes
 Organism_scientific: Clytia Gregaria
Organism_taxid: 27801
Gene: Gfp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.182 R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.091 91.446 110.612 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.55 Å
ligand GYS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2hpw.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (2hpw.pdb2.gz) 81 Kb
  • Biological Unit Coordinates (2hpw.pdb3.gz) 160 Kb
  • LPC: Ligand-Protein Contacts for 2HPW
  • CSU: Contacts of Structural Units for 2HPW
  • Likely Quarternary Molecular Structure file(s) for 2HPW
  • Structure Factors (379 Kb)
  • Retrieve 2HPW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HPW from S2C, [Save to disk]
  • Re-refined 2hpw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HPW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HPW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HPW, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hpw_A] [2hpw]
  • SWISS-PROT database: [Q6RYS7]
  • Domain organization of [Q6RYS7_9CNID] by SWISSPFAM
    • Other resources with information on 2HPW
  • Community annotation for 2HPW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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