2HYS Crystal structure of nitrophorin 2 complexed with cyanide date
authors Weichsel, A., Montfort, W.R.
compound source
symmetry
R_factor
R_Free 0.21625
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.20
ligand CYN, HEM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAssignment of the ferriheme resonances of the low-spin complexes of nitrophorins 1 and 4 by (1)H and (13)C NMR spectroscopy: comparison to structural data obtained from X-ray crystallography., Shokhireva TKh, Weichsel A, Smith KM, Berry RE, Shokhirev NV, Balfour CA, Zhang H, Montfort WR, Walker FA, Inorg Chem. 2007 Mar 19;46(6):2041-56. Epub 2007 Feb 10. PMID:17290983
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2hys.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 2HYS
  • CSU: Contacts of Structural Units for 2HYS
  • Likely Quarternary Molecular Structure file(s) for 2HYS
  • Structure Factors (596 Kb)
  • Retrieve 2HYS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HYS from S2C, [Save to disk]
  • Re-refined 2hys structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HYS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HYS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HYS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hys] [2hys_A]
  • SWISS-PROT database: [Q26241]
  • Domain organization of [NP2_RHOPR] by SWISSPFAM
    • Other resources with information on 2HYS
  • Community annotation for 2HYS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science