2I6D Transferase date Aug 28, 2006
title The Structure Of A Putative Rna Methyltransferase Of The Trm From Porphyromonas Gingivalis.
authors M.E.Cuff, K.E.Mussar, H.Li, S.Moy, A.Joachimiak, Midwest Center F Structural Genomics (Mcsg)
compound source
Molecule: Rna Methyltransferase, Trmh Family
Chain: A
Ec: 2.1.1.-
Engineered: Yes
 Organism_scientific: Porphyromonas Gingivalis
Organism_taxid: 242619
Strain: W83
Gene: Spou, Pg_0744
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Tigr4
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: C 2 2 21
R_factor 0.189 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.921 107.119 120.352 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand ACY, MSE enzyme Transferase E.C.2.1.1 BRENDA
Gene PG
Gene
Ontology
ChainFunctionProcessComponent
A
  • RNA methyltransferase activi...


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (2i6d.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (2i6d.pdb2.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 2I6D
  • CSU: Contacts of Structural Units for 2I6D
  • Likely Quarternary Molecular Structure file(s) for 2I6D
  • Structure Factors (170 Kb)
  • Retrieve 2I6D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I6D from S2C, [Save to disk]
  • Re-refined 2i6d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2I6D, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i6d_A] [2i6d]
  • SWISS-PROT database: [Q7MW92]
  • Domain organization of [Q7MW92_PORGI] by SWISSPFAM
    • Other resources with information on 2I6D
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