2IPX	Transferase	date	Oct 12, 2006
title	Human Fibrillarin
authors	J.Min, H.Wu, H.Zeng, P.Loppnau, J.Weigelt, M.Sundstrom, C.H.Arrows A.M.Edwards, A.Bochkarev, A.N.Plotnikov, Structural Genomics C (Sgc)
compound		source
Molecule: Rrna 2'-O-Methyltransferase Fibrillarin Chain: A Synonym: 34 Kda Nucleolar Scleroderma Antigen Ec: 2.1.1.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fbl, Fib1, Flrn Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 41 21 2	R_factor 0.200 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.261 57.261 135.028 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.82 Å
ligand	CA, MSE, MTA	enzyme	Transferase E.C.2.1.1 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (2ipx.pdb1.gz) 40 Kb LPC: Ligand-Protein Contacts for 2IPX CSU: Contacts of Structural Units for 2IPX Likely Quarternary Molecular Structure file(s) for 2IPX Structure Factors (305 Kb) Retrieve 2IPX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2IPX from S2C, [Save to disk] Re-refined 2ipx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2IPX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2IPX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2IPX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ipx_A] [2ipx] SWISS-PROT database: [P22087] Domain organization of [FBRL_HUMAN] by SWISSPFAM Domain found in 2IPX: [Fibrillarin ] by SMART

Other resources with information on 2IPX

Community annotation for 2IPX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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