2IS0	Hydrolase	date	Oct 16, 2006
title	Crystal Structure Of Human Beta-Secretase Complexed With Inh
authors	S.Munshi
compound		source
Molecule: Beta-Secretase 1 Chain: A Fragment: Protease Domain Synonym: Beta-Site App Cleaving Enzyme 1, Beta-Site Amyloid Protein Cleaving Enzyme 1, Membrane-Associated Aspartic Pro Memapsin-2, Aspartyl Protease 2, Asp 2, Asp2; Ec: 3.4.23.46 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bace1, Bace Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11a
symmetry	Space Group: C 2 2 21	R_factor 0.235 R_Free 0.271
crystal cell	length a length b length c angle alpha angle beta angle gamma 104.670 127.910 76.120 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	I03 BindingDB	enzyme	Hydrolase E.C.3.4.23.46 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of oxadiazoyl tertiary carbinamine inhibitors of beta-secretase (BACE-1)., Rajapakse HA, Nantermet PG, Selnick HG, Munshi S, McGaughey GB, Lindsley SR, Young MB, Lai MT, Espeseth AS, Shi XP, Colussi D, Pietrak B, Crouthamel MC, Tugusheva K, Huang Q, Xu M, Simon AJ, Kuo L, Hazuda DJ, Graham S, Vacca JP, J Med Chem. 2006 Dec 14;49(25):7270-3. PMID:17149856

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk] Biological Unit Coordinates (2is0.pdb1.gz) 66 Kb LPC: Ligand-Protein Contacts for 2IS0 CSU: Contacts of Structural Units for 2IS0 Likely Quarternary Molecular Structure file(s) for 2IS0 Retrieve 2IS0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2IS0 from S2C, [Save to disk]

View 2IS0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2IS0

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2IS0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2is0] [2is0_A] SWISS-PROT database: [P56817] Belongs to the β-amyloid cleaving enzyme (bace1) family according to TCDB. Domain organization of [BACE1_HUMAN] by SWISSPFAM

Other resources with information on 2IS0

Community annotation for 2IS0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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