2JPO Transport Protein date May 20, 2007
title Nmr Structure Of Antheraea Polyphemus Pheromone-Binding Prot Ph 4.5
authors F.F.Damberger, K.Wuthrich, W.S.Leal, Y.Ishida
compound source
Molecule: Pheromone-Binding Protein
Chain: A
Synonym: Pbp
Engineered: Yes
 Organism_scientific: Antheraea Polyphemus
Organism_common: Polyphemus Moth
Organism_taxid: 7120
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet22b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Basis of Ligand Binding and Release in Insect Pheromone-binding Proteins: NMR Structure of Antheraea polyphemus PBP1 at pH 4.5., Damberger FF, Ishida Y, Leal WS, Wuthrich K, J Mol Biol. 2007 Nov 2;373(4):811-9. Epub 2007 Aug 17. PMID:17884092
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (726 Kb) [Save to disk]
  • Biological Unit Coordinates (2jpo.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 2JPO
  • Original NMR restraints for 2JPO from PDB
  • Retrieve 2JPO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JPO from S2C, [Save to disk]
    • View 2JPO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JPO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JPO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jpo] [2jpo_A]
  • SWISS-PROT database: [P20797]
  • Domain organization of [PBP_ANTPO] by SWISSPFAM
  • Domain found in 2JPO: [PhBP ] by SMART
    • Other resources with information on 2JPO
  • Community annotation for 2JPO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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