2JUB Endonuclease Inhibitor date Aug 17, 2007
title Solution Structure Of Ipi
authors D.Rifat, N.T.Wright, K.M.Varney, D.J.Weber, L.W.Black
compound source
Molecule: Internal Protein I
Chain: A
Synonym: Ipi
Engineered: Yes
 Organism_scientific: Enterobacteria Phage T4
Organism_taxid: 10665
Gene: Ipi1, Ipi
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
methodSolution NMR
Primary referenceRestriction Endonuclease Inhibitor IPI* of Bacteriophage T4: A Novel Structure for a Dedicated Target., Rifat D, Wright NT, Varney KM, Weber DJ, Black LW, J Mol Biol. 2007 Nov 1;. PMID:18037438
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (382 Kb) [Save to disk]
  • Biological Unit Coordinates (2jub.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2JUB
  • Original NMR restraints for 2JUB from PDB
  • Retrieve 2JUB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JUB from S2C, [Save to disk]
    • View 2JUB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JUB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JUB, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jub] [2jub_A]
  • SWISS-PROT database: [P03718]
  • Domain organization of [IPI1_BPT4] by SWISSPFAM
    • Other resources with information on 2JUB
  • Community annotation for 2JUB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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