2JYA Structural Genomics, Unknown Function date Dec 07, 2007
title Nmr Solution Structure Of Protein Atu1810 From Agrobacterium Tumefaciens. Northeast Structural Genomics Consortium Targe Ontario Centre For Structural Proteomics Target Atc1776
authors A.Lemak, A.Yee, A.Gutmanas, C.Fares, M.Karra, A.Semesi, C.H.Arrows Northeast Structural Genomics Consortium (Nesg), Ontario Cen Structural Proteomics (Ocsp)
compound source
Molecule: Uncharacterized Protein Atu1810
Chain: A
Synonym: Agr_c_3324p
Engineered: Yes
 Organism_scientific: Agrobacterium Tumefaciens Str.
Organism_taxid: 176299
Strain: C58
Atcc: 33970
Gene: Atu1810, Agr_c_3324
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P11
methodSolution NMR
Gene AGR (C. caroliniana)
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (430 Kb) [Save to disk]
  • Biological Unit Coordinates (2jya.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 2JYA
  • Original NMR restraints for 2JYA from PDB
  • Retrieve 2JYA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JYA from S2C, [Save to disk]
    • View 2JYA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JYA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JYA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jya] [2jya_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2JYA
  • Community annotation for 2JYA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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