2K40 Dna Binding Protein date May 26, 2008
title Nmr Structure Of Hesx-1 Homeodomain Double Mutant R31le42l
authors J.Asensio, M.Torrado, C.Gonzalez, A.Bastida
compound source
Molecule: Homeobox Expressed In Es Cells 1
Chain: A
Fragment: Dna Binding Domain Of Human Transcription Factor (Unp Residues 108-174);
Synonym: Homeobox Protein Anf, Hanf
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hesx1, Hanf
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pt7-7
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (388 Kb) [Save to disk]
  • Biological Unit Coordinates (2k40.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 2K40
  • Original NMR restraints for 2K40 from PDB
  • Retrieve 2K40 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K40 from S2C, [Save to disk]
    • View 2K40 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K40
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K40, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k40_A] [2k40]
  • SWISS-PROT database: [Q9UBX0]
  • Domain organization of [HESX1_HUMAN] by SWISSPFAM
  • Domain found in 2K40: [HOX ] by SMART
    • Other resources with information on 2K40
  • Community annotation for 2K40 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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