2K7S Transcription date Aug 20, 2008
title Human Arnt C-Terminal Pas Domain, 3 Residue Ib Slip
authors M.R.Evans, P.B.Card, K.H.Gardner
compound source
Molecule: Aryl Hydrocarbon Receptor Nuclear Translocator
Chain: A
Fragment: Arnt Pas-B
Synonym: Arnt Protein, Dioxin Receptor, Nuclear Translocato Hypoxia-Inducible Factor 1 Beta, Hif-1 Beta;
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arnt
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Phis-Parallel
methodSolution NMR
Primary referenceARNT PAS-B has a fragile native state structure with an alternative beta-sheet register nearby in sequence space., Evans MR, Card PB, Gardner KH, Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2617-22. Epub 2009 Feb 5. PMID:19196990
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (636 Kb) [Save to disk]
  • Biological Unit Coordinates (2k7s.pdb1.gz) 32 Kb
  • CSU: Contacts of Structural Units for 2K7S
  • Original NMR restraints for 2K7S from PDB
  • Retrieve 2K7S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K7S from S2C, [Save to disk]
    • View 2K7S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K7S
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K7S, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k7s_A] [2k7s]
  • SWISS-PROT database: [P27540]
  • Domain organization of [ARNT_HUMAN] by SWISSPFAM
  • Domains found in 2K7S: [PAC] [PAS ] by SMART
    • Other resources with information on 2K7S
  • Community annotation for 2K7S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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