2KBJ Toxin date Nov 28, 2008
title Solution Structure Of Bmkalphatx11 (Minor Conformation)
authors J.Zhu, H.Wu
compound source
Molecule: Toxin Bmka2
Chain: A
Synonym: Bmkalphatx11, Toxin Bmtx11', Bmkalphatx11', Alpha- Tx11, Alpha-Toxin 2, Bmkalpha2
 Organism_scientific: Mesobuthus Martensii
Organism_common: Manchurian Scorpion
Organism_taxid: 34649
Other_details: Buthus Martensii Karsch
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceSolution structure of BmKalphaTx11, a toxin from the venom of the Chinese scorpion Buthus martensii Karsch., Zhu J, Tong X, Cao C, Wu G, Zhang N, Wu H, Biochem Biophys Res Commun. 2009 Nov 22. PMID:19932686
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (289 Kb) [Save to disk]
  • Biological Unit Coordinates (2kbj.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2KBJ
  • Original NMR restraints for 2KBJ from PDB
  • Retrieve 2KBJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KBJ from S2C, [Save to disk]
    • View 2KBJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KBJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KBJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kbj] [2kbj_A]
  • SWISS-PROT database: [Q9NJC7]
  • Domain organization of [SC11_MESMA] by SWISSPFAM
  • Domain found in 2KBJ: [Knot1 ] by SMART
    • Other resources with information on 2KBJ
  • Community annotation for 2KBJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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