2KD0 Signaling Protein date Dec 31, 2008
title Nmr Solution Structure Of O64736 Protein From Arabidopsis Th Northeast Structural Genomics Consortium Mega Target Ar3445
authors G.V.T.Swapna, R.Shastry, E.Foote, C.Ciccosanti, M.Jiang, R.Xiao, R J.Everett, Y.Huang, T.B.Acton, B.Rost, G.T.Montelione, Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Lrr Repeats And Ubiquitin-Like Domain-Containing At2g30105;
Chain: A
Fragment: Unp Residues 11-85
Engineered: Yes
Other_details: The First 10 Residues Of The Sequence Mghhhh Correspond To A N-Terminal Tag.
 Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress, Thale-Cress
Organism_taxid: 3702
Gene: At2g30105, T27e13.16
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet14-15c
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (483 Kb) [Save to disk]
  • Biological Unit Coordinates (2kd0.pdb1.gz) 25 Kb
  • CSU: Contacts of Structural Units for 2KD0
  • Original NMR restraints for 2KD0 from PDB
  • Retrieve 2KD0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KD0 from S2C, [Save to disk]
    • View 2KD0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KD0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KD0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kd0] [2kd0_A]
  • SWISS-PROT database: [P0C895]
  • Domain organization of [Y2010_ARATH] by SWISSPFAM
  • Domain found in 2KD0: [UBQ ] by SMART
    • Other resources with information on 2KD0
  • Community annotation for 2KD0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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