2KG2 Protein Binding date Mar 02, 2009
title Solution Structure Of A Pdz Protein
authors M.A.Durney, G.Birrane, C.Anklin, A.Soni, J.A.A.Ladias
compound source
Molecule: Tax1-Binding Protein 3
Chain: A
Synonym: Tax Interaction Protein 1, Tip-1, Glutaminase-Inte Protein 3;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tax1bp3, Tip1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Phmth
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the human Tax-interacting protein-1., Durney MA, Birrane G, Anklin C, Soni A, Ladias JA, J Biomol NMR. 2009 Nov;45(3):329-34. Epub 2009 Aug 15. PMID:19685007
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (647 Kb) [Save to disk]
  • Biological Unit Coordinates (2kg2.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 2KG2
  • Original NMR restraints for 2KG2 from PDB
  • Retrieve 2KG2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KG2 from S2C, [Save to disk]
    • View 2KG2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KG2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KG2, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kg2_A] [2kg2]
  • SWISS-PROT database: [O14907]
  • Domain organization of [TX1B3_HUMAN] by SWISSPFAM
  • Domain found in 2KG2: [PDZ ] by SMART
    • Other resources with information on 2KG2
  • Community annotation for 2KG2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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