2KK8 Structural Genomics, Unknown Function date Jun 16, 2009
title Nmr Solution Structure Of A Putative Uncharacterized Protein From Arabidopsis Thaliana: Northeast Structural Genomics Co Target Ar3449a
authors R.Mani, S.V.T.Gurla, R.Shastry, C.Ciccosanti, E.Foote, M.Jiang, R. R.Nair, J.Everett, Y.Huang, T.Acton, B.Rost, G.T.Montelione, Nort Structural Genomics Consortium (Nesg)
compound source
Molecule: Uncharacterized Protein At4g05270
Chain: A
Fragment: Sequence Database Residues 1-74
Engineered: Yes
 Organism_scientific: Arabidopsis Thaliana
Organism_common: Thale-Cress
Organism_taxid: 3702
Gene: At4g05270
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+ Magic
Expression_system_vector: Pet21-23c
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (496 Kb) [Save to disk]
  • Biological Unit Coordinates (2kk8.pdb1.gz) 25 Kb
  • CSU: Contacts of Structural Units for 2KK8
  • Original NMR restraints for 2KK8 from PDB
  • Retrieve 2KK8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KK8 from S2C, [Save to disk]
    • View 2KK8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KK8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KK8, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kk8] [2kk8_A]
  • SWISS-PROT database: [Q9M0W8]
  • Domain organization of [Q9M0W8_ARATH] by SWISSPFAM
  • Domain found in 2KK8: [UBQ ] by SMART
    • Other resources with information on 2KK8
  • Community annotation for 2KK8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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