2KRA Contractile Protein date Dec 14, 2009
title Solution Structure Of Bv8
authors N.L.Daly, D.J.Craik, M.Mobli
compound source
Molecule: Prokineticin Bv8
Chain: A
Engineered: Yes
 Organism_scientific: Bombina Variegata
Organism_common: Yellow-Bellied Toad
Organism_taxid: 8348
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceChemical synthesis and structure of the prokineticin Bv8., Morales RA, Daly NL, Vetter I, Mobli M, Napier IA, Craik DJ, Lewis RJ, Christie MJ, King GF, Alewood PF, Durek T, Chembiochem. 2010 Sep 3;11(13):1882-8. doi: 10.1002/cbic.201000330. PMID:20677202
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (363 Kb) [Save to disk]
  • Biological Unit Coordinates (2kra.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 2KRA
  • Original NMR restraints for 2KRA from PDB
  • Retrieve 2KRA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KRA from S2C, [Save to disk]
    • View 2KRA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KRA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KRA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kra_A] [2kra]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2KRA
  • Community annotation for 2KRA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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