2L0T Solution structure of the complex of ubiquitin and the VHS domain of Stam2 date
authors Lange, A., Hoeller, D., Wienk, H., Marcillat, O., Lancelin, J., Walker, O.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceNMR Reveals a Different Mode of Binding of the Stam2 VHS Domain to Ubiquitin and Diubiquitin ., Lange A, Hoeller D, Wienk H, Marcillat O, Lancelin JM, Walker O, Biochemistry. 2010 Dec 13. PMID:21121635
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (692 Kb) [Save to disk]
  • Biological Unit Coordinates (2l0t.pdb1.gz) 70 Kb
  • CSU: Contacts of Structural Units for 2L0T
  • Original NMR restraints for 2L0T from PDB
  • Retrieve 2L0T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L0T from S2C, [Save to disk]
    • View 2L0T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2L0T
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2L0T, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l0t_A] [2l0t_B] [2l0t]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 2L0T: [UBQ] [VHS ] by SMART
    • Other resources with information on 2L0T
  • Community annotation for 2L0T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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