2LJ4	Isomerase	date	Sep 06, 2011
title	Solution Structure Of The Tbpin1
authors	L.Sun, D.Lin, Y.Zhao
compound		source
Molecule: Peptidyl-Prolyl Cis-Trans Isomeraserotamase, Put Chain: A Synonym: Prolyl Cistrans Isomerase Tbpin1 Ec: 5.2.1.8 Engineered: Yes		Organism_scientific: Trypanosoma Brucei Organism_taxid: 5691 Gene: Tbpin1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Vector Expression_system_vector: Pet28b
method	Solution NMR
ligand		enzyme	Isomerase E.C.5.2.1.8 BRENDA
Gene Ontology	Chain Function Process Component A peptidyl-prolyl cis-trans is... isomerase activity protein peptidyl-prolyl isom... protein folding

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (643 Kb) [Save to disk] Biological Unit Coordinates (2lj4.pdb1.gz) 33 Kb CSU: Contacts of Structural Units for 2LJ4 Original NMR restraints for 2LJ4 from PDB Retrieve 2LJ4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2LJ4 from S2C, [Save to disk]

View 2LJ4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 2LJ4

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2LJ4, from MSDmotif at EBI Fold representative 2lj4 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2lj4_A] SWISS-PROT database: Domain organization of by SWISSPFAM Alignments of the sequence of 2LJ4 with the sequences similar proteins can be viewed for 2LJ4's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.

Other resources with information on 2LJ4

Community annotation for 2LJ4 at PDBWiki (http://pdbwiki.org)

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