2LN4 Antimicrobial Protein date Dec 16, 2011
title Insight Into The Antimicrobial Activities Based On The Struc Activity Relationships Of Coprisin Isolated From The Dung B Copris Tripartitus
authors Y.Kim, J.K.Kim, E.Lee
compound source
Molecule: Coprisin
Chain: A
Fragment: Unp Residues 38-80
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Copris Tripartitus
Organism_taxid: 438892
methodSolution NMR
ligand NH2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInsight into the antimicrobial activities of coprisin isolated from the dung beetle, Copris tripartitus, revealed by structure-activity relationships., Lee E, Kim JK, Shin S, Jeong KW, Shin A, Lee J, Lee DG, Hwang JS, Kim Y, Biochim Biophys Acta. 2012 Nov 6. pii: S0005-2736(12)00377-X. doi:, 10.1016/j.bbamem.2012.10.028. PMID:23137439
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk]
  • Biological Unit Coordinates (2ln4.pdb1.gz) 12 Kb
  • LPC: Ligand-Protein Contacts for 2LN4
  • CSU: Contacts of Structural Units for 2LN4
  • Original NMR restraints for 2LN4 from PDB
  • Retrieve 2LN4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LN4 from S2C, [Save to disk]
    • View 2LN4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LN4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LN4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ln4] [2ln4_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LN4: [Knot1 ] by SMART
    • Other resources with information on 2LN4
  • Community annotation for 2LN4 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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