2LU0 Rna date Jun 05, 2012
title Nmr Solution Structure Of The Kappa-Zeta Region Of S.Cerevis II Intron Ai5(Gamma)
authors D.Donghi, M.Pechlaner, C.Finazzo, B.Knobloch, R.K.O.Sigel
compound source
Molecule: Rna (49-Mer)
Chain: A
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_taxid: 4932
Other_details: Sequence Occurs Naturally In S.Cerevisiae An Synthesized In Vitro Using T7 Polymerase And Synthetic Dna Oligonucleotides
methodSolution NMR
Primary referenceThe structural stabilization of the kappa three-way junction by Mg(II) represents the first step in the folding of a group II intron., Donghi D, Pechlaner M, Finazzo C, Knobloch B, Sigel RK, Nucleic Acids Res. 2013 Feb 1;41(4):2489-504. doi: 10.1093/nar/gks1179. Epub 2012, Dec 28. PMID:23275550
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (505 Kb) [Save to disk]
  • Biological Unit Coordinates (2lu0.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 2LU0
  • Original NMR restraints for 2LU0 from PDB
  • Retrieve 2LU0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LU0 from S2C, [Save to disk]
    • View 2LU0 in 3D
  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 2LU0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LU0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lu0_A] [2lu0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2LU0
  • Community annotation for 2LU0 at PDBWiki (http://pdbwiki.org)

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