2M00 Solution structure of staphylococcal nuclease E43S mutant in the presence of ssDNA and Cd2+ date
authors Xie, T., Feng, Y., Shan, L., Wang, J.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceModeling of the [E43S]SNase-ssDNA-Cd(2+) complex: Structural insight into the action of nuclease on ssDNA., Xie T, Feng Y, Shan L, Wang J, Arch Biochem Biophys. 2013 Feb 14. pii: S0003-9861(13)00038-6. doi:, 10.1016/j.abb.2013.02.003. PMID:23416741
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (775 Kb) [Save to disk]
  • Biological Unit Coordinates (2m00.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2M00
  • Original NMR restraints for 2M00 from PDB
  • Retrieve 2M00 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M00 from S2C, [Save to disk]
  • View 2M00 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M00
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M00, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m00] [2m00_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M00: [SNc ] by SMART
  • Other resources with information on 2M00
  • Community annotation for 2M00 at PDBWiki (http://pdbwiki.org)

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