2MAI Antibiotic date Jul 09, 2013
title Nmr Structure Of Lassomycin
authors E.Gavrish, C.S.Sit, O.Kandror, A.Spoering, A.Peoples, L.Ling, A.Fe D.Hughes, S.Cao, A.Bissell, H.Torrey, T.Akopian, A.Mueller, S.Eps A.Goldberg, J.Clardy, K.Lewis
compound source
Molecule: Lassomycin
Chain: A
 Organism_scientific: Lentzea Kentuckyensis
Organism_taxid: 360086
methodSolution NMR
ligand ILM enzyme
Primary referenceLassomycin, a Ribosomally Synthesized Cyclic Peptide, Kills Mycobacterium tuberculosis by Targeting the ATP-Dependent Protease ClpC1P1P2., Gavrish E, Sit CS, Cao S, Kandror O, Spoering A, Peoples A, Ling L, Fetterman A, Hughes D, Bissell A, Torrey H, Akopian T, Mueller A, Epstein S, Goldberg A, Clardy J, Lewis K, Chem Biol. 2014 Apr 24;21(4):509-18. doi: 10.1016/j.chembiol.2014.01.014. Epub, 2014 Mar 27. PMID:24684906
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (2mai.pdb1.gz) 6 Kb
  • LPC: Ligand-Protein Contacts for 2MAI
  • CSU: Contacts of Structural Units for 2MAI
  • Original NMR restraints for 2MAI from PDB
  • Retrieve 2MAI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MAI from S2C, [Save to disk]
    • View 2MAI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2MAI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2MAI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mai_A] [2mai]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2MAI
  • Community annotation for 2MAI at PDBWiki (http://pdbwiki.org)

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