2N48 EC-NMR Structure of Escherichia coli YiaD Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target ER553 date
authors Tang, Y., Huang, Y.J., Hopf, T.A., Sander, C., Marks, D., Montelione, G.T., NESG, Northeast.Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceProtein structure determination by combining sparse NMR data with evolutionary couplings., Tang Y, Huang YJ, Hopf TA, Sander C, Marks DS, Montelione GT, Nat Methods. 2015 Jun 29. doi: 10.1038/nmeth.3455. PMID:26121406
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (729 Kb) [Save to disk]
  • Biological Unit Coordinates (2n48.pdb1.gz) 37 Kb
  • CSU: Contacts of Structural Units for 2N48
  • Original NMR restraints for 2N48 from PDB
  • Retrieve 2N48 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2N48 from S2C, [Save to disk]
  • View 2N48 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2N48
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2n48] [2n48_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2N48
  • Community annotation for 2N48 at PDBWiki (http://pdbwiki.org)

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