2ND0 Solution NMR structures of BRD4 ET domain with LANA peptide date
authors Zeng, L., Zhou, M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructural Mechanism of Transcriptional Regulator NSD3 Recognition by the ET Domain of BRD4., Zhang Q, Zeng L, Shen C, Ju Y, Konuma T, Zhao C, Vakoc CR, Zhou MM, Structure. 2016 Jul 6;24(7):1201-8. doi: 10.1016/j.str.2016.04.019. Epub 2016 Jun, 9. PMID:27291650
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (568 Kb) [Save to disk]
  • Biological Unit Coordinates (2nd0.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 2ND0
  • Original NMR restraints for 2ND0 from PDB
  • Retrieve 2ND0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ND0 from S2C, [Save to disk]
    • View 2ND0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2ND0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nd0] [2nd0_A] [2nd0_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2ND0
  • Community annotation for 2ND0 at PDBWiki (http://pdbwiki.org)

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