2NSZ	Antitumor Protein	date	Nov 06, 2006
title	1.15 Angstrom Crystal Structure Of The Ma3 Domain Of Pdcd4
authors	N.Laronde-Leblanc, A.Wlodawer
compound		source
Molecule: Programmed Cell Death Protein 4 Chain: A Fragment: C-Terminal Ma3 Domain, Residues 322-450 Synonym: Topoisomerase-Inhibitor Suppressed Protein, Protei Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Pdcd4, Ma3, Tis Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pdest14
symmetry	Space Group: P 31 2 1	R_factor 0.132 R_Free 0.150
crystal cell	length a length b length c angle alpha angle beta angle gamma 61.520 61.520 77.751 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.15 Å
ligand	GOL, SO4	enzyme
note	2NSZ is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis for inhibition of translation by the tumor suppressor Pdcd4., Laronde-Leblanc N, Santhanam AN, Baker AR, Wlodawer A, Colburn NH, Mol Cell Biol. 2006 Oct 23;. PMID:17060447

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (2nsz.pdb1.gz) 52 Kb LPC: Ligand-Protein Contacts for 2NSZ CSU: Contacts of Structural Units for 2NSZ Likely Quarternary Molecular Structure file(s) for 2NSZ Structure Factors (844 Kb) Retrieve 2NSZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2NSZ from S2C, [Save to disk] Re-refined 2nsz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2NSZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2NSZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2NSZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2nsz_A] [2nsz] SWISS-PROT database: [Q61823] Domain organization of [PDCD4_MOUSE] by SWISSPFAM Domain found in 2NSZ: [MA3 ] by SMART

Other resources with information on 2NSZ

Community annotation for 2NSZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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