2O0M Transcription date Nov 27, 2006
title The Crystal Structure Of The Putative Sorc Family Transcript Regulator From Enterococcus Faecalis
authors R.Zhang, M.Zhou, M.Bargassa, A.Joachimiak, Midwest Center For St Genomics (Mcsg)
compound source
Molecule: Transcriptional Regulator, Sorc Family
Chain: A
Engineered: Yes
 Organism_scientific: Enterococcus Faecalis
Organism_taxid: 226185
Strain: V583
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: C 1 2 1
R_factor 0.164 R_Free 0.201
crystal
cell
length a length b length c angle alpha angle beta angle gamma
115.398 41.660 64.267 90.00 118.48 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand MSE, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (2o0m.pdb1.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 2O0M
  • CSU: Contacts of Structural Units for 2O0M
  • Likely Quarternary Molecular Structure file(s) for 2O0M
  • Structure Factors (256 Kb)
  • Retrieve 2O0M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2O0M from S2C, [Save to disk]
  • Re-refined 2o0m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2O0M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2O0M
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2O0M, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2o0m] [2o0m_A]
  • SWISS-PROT database: [Q833I7]
  • Domain organization of [Q833I7_ENTFA] by SWISSPFAM
    • Other resources with information on 2O0M
  • Community annotation for 2O0M at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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