2O1O	Structural Genomics, Unknown Function	date	Nov 29, 2006
title	Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Syn (Cgd4_2550) In Complex With Risedronate.
authors	M.Chruszcz, J.D.Artz, A.Dong, J.Dunford, J.Lew, Y.Zhao, I.Kozierad K.L.Kavanaugh, U.Oppermann, M.Sundstrom, J.Weigelt, A.M.Edwards C.H.Arrowsmith, A.Bochkarev, R.Hui, W.Minor, Structural Genomic Consortium (Sgc)
compound		source
Molecule: Putative Farnesyl Pyrophosphate Synthase Chain: A, B Fragment: Residues 38-384 Engineered: Yes		Organism_scientific: Cryptosporidium Parvum Organism_taxid: 5807 Gene: Cgd4_2550 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-(De3)-Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: P28a-Lic
symmetry	Space Group: P 31	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 101.758 101.758 75.313 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.42 Å
ligand	MG, RIS BindingDB	enzyme
Gene	CGD4
Gene Ontology	Chain Function Process Component A, B
Primary reference	Targeting a uniquely nonspecific prenyl synthase with bisphosphonates to combat cryptosporidiosis., Artz JD, Dunford JE, Arrowood MJ, Dong A, Chruszcz M, Kavanagh KL, Minor W, Russell RG, Ebetino FH, Oppermann U, Hui R, Chem Biol. 2008 Dec 22;15(12):1296-306. PMID:19101474

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk] Biological Unit Coordinates (2o1o.pdb1.gz) 108 Kb LPC: Ligand-Protein Contacts for 2O1O CSU: Contacts of Structural Units for 2O1O Likely Quarternary Molecular Structure file(s) for 2O1O Structure Factors (575 Kb) Retrieve 2O1O in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2O1O from S2C, [Save to disk] Re-refined 2o1o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2O1O in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2O1O

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2O1O, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2o1o_B] [2o1o] [2o1o_A] SWISS-PROT database: [Q5CR09] Domain organization of [Q5CR09_CRYPV] by SWISSPFAM

Other resources with information on 2O1O

Community annotation for 2O1O at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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