2OA9 Hydrolase date Dec 15, 2006
title Restriction Endonuclease Mvai In The Absence Of Dna
authors M.Kaus-Drobek, H.Czapinska, M.Sokolowska, G.Tamulaitis, R.H.Szczepanowski, K.Urbanke, V.Siksnys, M.Bochtler
compound source
Molecule: R.Mvai
Chain: A, B
Engineered: Yes
 Organism_scientific: Kocuria Varians
Organism_taxid: 1272
Gene: Mvair
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Er2566
Expression_system_vector_type: Plasmid
Expression_system_vector: Pbad24(Apr)
Expression_system_plasmid: Pbad24_r.Mvai
symmetry Space Group: P 1 21 1
R_factor 0.184 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.499 63.281 71.892 90.00 100.77 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand ACT, CD, CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceRestriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically., Kaus-Drobek M, Czapinska H, Sokolowska M, Tamulaitis G, Szczepanowski RH, Urbanke C, Siksnys V, Bochtler M, Nucleic Acids Res. 2007;35(6):2035-46. Epub 2007 Mar 7. PMID:17344322
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (2oa9.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (2oa9.pdb2.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 2OA9
  • CSU: Contacts of Structural Units for 2OA9
  • Likely Quarternary Molecular Structure file(s) for 2OA9
  • Structure Factors (490 Kb)
  • Retrieve 2OA9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OA9 from S2C, [Save to disk]
  • Re-refined 2oa9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2OA9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2OA9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OA9, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2oa9_A] [2oa9] [2oa9_B]
  • SWISS-PROT database: [Q8RNV5]
  • Domain organization of [Q8RNV5_MICVA] by SWISSPFAM
    • Other resources with information on 2OA9
  • Community annotation for 2OA9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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