2OCS	Structural Protein	date	Dec 21, 2006
title	The Crystal Structure Of The First Pdz Domain Of Human Nherf (Slc9a3r2)
authors	E.Papagrigoriou, C.Phillips, C.Gileadi, J.Elkins, E.Salah, G.Berr P.Savitsky, F.Gorrec, C.Umeano, E.Ugochukwu, O.Gileadi, N.Burges A.Edwards, C.H.Arrowsmith, J.Weigelt, M.Sundstrom, D.A.Doyle, St Genomics Consortium (Sgc)
compound		source
Molecule: Na(+)H(+) Exchange Regulatory Cofactor Nhe-Rf2 Chain: A Synonym: Nherf-2, Tyrosine Kinase Activator Protein 1, Tka- Interacting Protein 1, Sip-1, Solute Carrier Family 9 Isofo Regulatory Factor 2, Nhe3 Kinase A Regulatory Protein E3kar Hydrogen Exchanger Regulatory Factor 2; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Slc9a3r2, Nherf2 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: P 1 21 1	R_factor 0.152 R_Free 0.198
crystal cell	length a length b length c angle alpha angle beta angle gamma 26.556 39.867 37.278 90.00 106.93 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	EDO, SCN	enzyme
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (2ocs.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 2OCS CSU: Contacts of Structural Units for 2OCS Likely Quarternary Molecular Structure file(s) for 2OCS Structure Factors (166 Kb) Retrieve 2OCS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OCS from S2C, [Save to disk] Re-refined 2ocs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OCS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OCS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OCS, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ocs] [2ocs_A] SWISS-PROT database: [Q15599] Belongs to the ezrin/radixin/moesin-binding phosphoprotein 50 (ebp50) family according to TCDB. Domain organization of [NHRF2_HUMAN] by SWISSPFAM Domain found in 2OCS: [PDZ ] by SMART

Other resources with information on 2OCS

Community annotation for 2OCS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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