2OHY Lyase, Transferase date Jan 10, 2007
title X-Ray Crystal Structure Of Tyrosine Aminomutase From Strepto Globisporus
authors C.Christianson, S.Bruner
compound source
Molecule: Tyrosine Aminomutase
Chain: A, B
Synonym: Ammonia Lyasetransferase
Ec: 5.4.3.6
Engineered: Yes
Organism_scientific: Streptomyces Globisporus
Organism_taxid: 1908
Strain: Sgcc4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 28a
symmetry Space Group: P 21 21 2
R_factor 0.192 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.597 146.178 75.437 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand MDO enzyme Isomerase E.C.5.4.3.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe Structure of l-Tyrosine 2,3-Aminomutase from the C-1027 Enediyne Antitumor Antibiotic Biosynthetic Pathway(,)., Christianson CV, Montavon TJ, Lanen SG, Shen B, Bruner SD, Biochemistry. 2007 Jun 19;46(24):7205-7214. Epub 2007 May 22. PMID:17516659
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk]
  • Biological Unit Coordinates (2ohy.pdb1.gz) 327 Kb
  • LPC: Ligand-Protein Contacts for 2OHY
  • CSU: Contacts of Structural Units for 2OHY
  • Likely Quarternary Molecular Structure file(s) for 2OHY
  • Structure Factors (388 Kb)
  • Retrieve 2OHY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OHY from S2C, [Save to disk]
  • Re-refined 2ohy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OHY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OHY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OHY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ohy_A] [2ohy_B] [2ohy]
  • SWISS-PROT database: [Q8GMG0]
  • Domain organization of [Q8GMG0_STRGL] by SWISSPFAM
  • Other resources with information on 2OHY
  • Community annotation for 2OHY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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