2OJF	Transferase	date	Jan 12, 2007
title	Crystal Structure Of Protein Kinase A In Complex With Pyridi Pyrazolopyridine Based Inhibitors
authors	V.S.Stoll
compound		source
Molecule: Camp-Dependent Protein Kinase, Alpha-Catalytic Su Chain: E Synonym: Pka C-Alpha Ec: 2.7.11.11 Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Gene: Prkaca
Molecule: Inhibitory Peptide Chain: I Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 21 21 21	R_factor 0.265 R_Free 0.290
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.762 75.447 80.397 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	4PY BindingDB	enzyme	Transferase E.C.2.7.11.11 BRENDA
Gene Ontology	Chain Function Process Component E
Primary reference	Design and synthesis of pyridine-pyrazolopyridine-based inhibitors of protein kinase B/Akt., Zhu GD, Gong J, Gandhi VB, Woods K, Luo Y, Liu X, Guan R, Klinghofer V, Johnson EF, Stoll VS, Mamo M, Li Q, Rosenberg SH, Giranda VL, Bioorg Med Chem. 2007 Mar 15;15(6):2441-52. Epub 2007 Jan 17. PMID:17258463

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (2ojf.pdb1.gz) 58 Kb LPC: Ligand-Protein Contacts for 2OJF CSU: Contacts of Structural Units for 2OJF Likely Quarternary Molecular Structure file(s) for 2OJF Retrieve 2OJF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OJF from S2C, [Save to disk]

View 2OJF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OJF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OJF, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ojf_E] [2ojf] [2ojf_I] SWISS-PROT database: [P00517] Domain organization of [KAPCA_BOVIN] by SWISSPFAM Domains found in 2OJF: [S_TK_X] [S_TKc ] by SMART

Other resources with information on 2OJF

Community annotation for 2OJF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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