2OQ5	Hydrolase	date	Jan 31, 2007
title	Crystal Structure Of Desc1, A New Member Of The Type II Tran Serine Proteinases Family
authors	O.J.P.Kyrieleis, R.Huber, E.L.Madison, U.Jacob
compound		source
Molecule: Transmembrane Protease, Serine 11e Chain: A Synonym: Serine Protease Desc1, Transmembrane Protease, Ser Catalytic Chain; Ec: 3.4.21.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tmprss11e, Desc1 Expression_system: Pichia Pastoris Expression_system_taxid: 4922 Expression_system_strain: Smd 1168 Expression_system_vector_type: Plasmid Expression_system_plasmid: Ppic9k
symmetry	Space Group: P 2 21 21	R_factor 0.210 R_Free 0.224
crystal cell	length a length b length c angle alpha angle beta angle gamma 47.900 70.200 80.200 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.61 Å
ligand	BEN	enzyme	Hydrolase E.C.3.4.21 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the catalytic domain of DESC1, a new member of the type II transmembrane serine proteinase family., Kyrieleis OJ, Huber R, Ong E, Oehler R, Hunter M, Madison EL, Jacob U, FEBS J. 2007 Mar 27;. PMID:17388811

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk] Biological Unit Coordinates (2oq5.pdb1.gz) 38 Kb LPC: Ligand-Protein Contacts for 2OQ5 CSU: Contacts of Structural Units for 2OQ5 Likely Quarternary Molecular Structure file(s) for 2OQ5 Structure Factors (348 Kb) Retrieve 2OQ5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OQ5 from S2C, [Save to disk] Re-refined 2oq5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OQ5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OQ5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OQ5, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2oq5] [2oq5_A] SWISS-PROT database: [Q9UL52] Domain organization of [TM11E_HUMAN] by SWISSPFAM Domain found in 2OQ5: [Tryp_SPc ] by SMART

Other resources with information on 2OQ5

Community annotation for 2OQ5 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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