2OS7 Chaperone date Feb 05, 2007
title Caf1m Periplasmic Chaperone Tetramer
authors S.D.Knight, A.Z.Zavialov
compound source
Molecule: Chaperone Protein Caf1m
Chain: A, B, C, D, E, F
Synonym: Capsule Protein Fraction 1
Engineered: Yes
Organism_scientific: Yersinia Pestis
Organism_taxid: 632
Gene: Caf1m
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptca1
symmetry Space Group: P 21 21 2
R_factor 0.249 R_Free 0.298
crystal
cell
length a length b length c angle alpha angle beta angle gamma
141.092 174.267 60.580 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceA novel self-capping mechanism controls aggregation of periplasmic chaperone Caf1M., Zavialov AV, Knight SD, Mol Microbiol. 2007 Apr;64(1):153-64. PMID:17376079
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk]
  • Biological Unit Coordinates (2os7.pdb1.gz) 125 Kb
  • Biological Unit Coordinates (2os7.pdb2.gz) 122 Kb
  • CSU: Contacts of Structural Units for 2OS7
  • Likely Quarternary Molecular Structure file(s) for 2OS7
  • Structure Factors (1851 Kb)
  • Retrieve 2OS7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OS7 from S2C, [Save to disk]
  • Re-refined 2os7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OS7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OS7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OS7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2os7_C] [2os7] [2os7_E] [2os7_D] [2os7_B] [2os7_F] [2os7_A]
  • SWISS-PROT database: [P26926]
  • Domain organization of [CAF1M_YERPE] by SWISSPFAM
  • Other resources with information on 2OS7
  • Community annotation for 2OS7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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