2P3T	Blood Clotting	date	Mar 09, 2007
title	Crystal Structure Of Human Factor Xa Complexed With 3-Chloro Methylamino-Imidazol-1-Ylmethyl)-Thiophene-2-Carboxylic Aci Chloro-2-(5-Chloro-Pyridin-2-Ylcarbamoyl)-6-Methoxy-Phenyl]
authors	M.Adler, M.Whitlow
compound		source
Molecule: Coagulation Factor X Chain: A Fragment: Egf-Like 2 Domain Synonym: Stuart Factor, Stuart-Prower Factor		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: Extracted From Blood
Molecule: Coagulation Factor X Chain: B Fragment: Catalytic Domain Synonym: Stuart Factor, Stuart-Prower Factor Ec: 3.4.21.6		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: Extracted From Blood
symmetry	Space Group: P 21 21 21	R_factor 0.191 R_Free 0.219
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.060 72.510 78.460 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.92 Å
ligand	993, CA, CL BindingDB	enzyme	Hydrolase E.C.3.4.21.6 BRENDA
Gene Ontology	Chain Function Process Component B
Primary reference	Thiophene-anthranilamides as highly potent and orally available factor xa inhibitors(1)., Ye B, Arnaiz DO, Chou YL, Griedel BD, Karanjawala R, Lee W, Morrissey MM, Sacchi KL, Sakata ST, Shaw KJ, Wu SC, Zhao Z, Adler M, Cheeseman S, Dole WP, Ewing J, Fitch R, Lentz D, Liang A, Light D, Morser J, Post J, Rumennik G, Subramanyam B, Sullivan ME, Vergona R, Walters J, Wang YX, White KA, Whitlow M, Kochanny MJ, J Med Chem. 2007 Jun 28;50(13):2967-80. Epub 2007 May 31. PMID:17536795

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk] Biological Unit Coordinates (2p3t.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 2P3T CSU: Contacts of Structural Units for 2P3T Likely Quarternary Molecular Structure file(s) for 2P3T Structure Factors (163 Kb) Retrieve 2P3T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2P3T from S2C, [Save to disk] Re-refined 2p3t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2P3T in 3D

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Visual 3D analysis of 2P3T

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2P3T, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2p3t] [2p3t_A] [2p3t_B] SWISS-PROT database: [P00742] Domain organization of [FA10_HUMAN] by SWISSPFAM Domains found in 2P3T: [EGF] [Tryp_SPc ] by SMART

Other resources with information on 2P3T

Community annotation for 2P3T at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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