2PLU Isomerase date Apr 20, 2007
title Crystal Structure Of Cryptosporidium Parvum Cyclophilin Type Prolyl Cis-Trans Isomerase Cgd2_4120
authors A.K.Wernimont, J.Lew, T.Hills, I.Kozieradzki, Y.H.Lin, A.Hassanal M.Schapira, C.H.Arrowsmith, A.M.Edwards, J.Weigelt, M.Sundstrom A.Bochkarev, R.Hui, J.D.Artz, T.Xiao, Structural Genomics Conso (Sgc)
compound source
Molecule: 20k Cyclophilin, Putative
Chain: A
Engineered: Yes
 Organism_scientific: Cryptosporidium Parvum Iowa II
Organism_taxid: 353152
Strain: Iowa Type II
Gene: Cgd2_4120
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5a
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P15_mhl
symmetry Space Group: P 31 2 1
R_factor 0.175 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.856 56.856 107.255 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.82 Å
Gene CGD2
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (2plu.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2PLU
  • Likely Quarternary Molecular Structure file(s) for 2PLU
  • Structure Factors (136 Kb)
  • Retrieve 2PLU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PLU from S2C, [Save to disk]
  • Re-refined 2plu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2PLU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2PLU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PLU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2plu] [2plu_A]
  • SWISS-PROT database: [A3FQA7]
  • Domain organization of [A3FQA7_CRYPV] by SWISSPFAM
    • Other resources with information on 2PLU
  • Community annotation for 2PLU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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