2PN6	Transcription	date	Apr 23, 2007
title	Crystal Structure Of S32a Of St1022-Gln Complex From Sulfolo Tokodaii
authors	T.S.Kumarevel, P.Karthe, N.Nakano, A.Shinkai, S.Yokoyama, Riken S Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: 150aa Long Hypothetical Transcriptional Regulator Chain: A Synonym: St1022 Engineered: Yes Mutation: Yes		Organism_scientific: Sulfolobus Tokodaii Organism_taxid: 111955 Gene: St1022 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Bl21(De3)
symmetry	Space Group: I 4 2 2	R_factor 0.207 R_Free 0.223
crystal cell	length a length b length c angle alpha angle beta angle gamma 103.663 103.663 73.539 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.44 Å
ligand	GLN, MG	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding., Kumarevel T, Nakano N, Ponnuraj K, Gopinath SC, Sakamoto K, Shinkai A, Kumar PK, Yokoyama S, Nucleic Acids Res. 2008 Aug;36(14):4808-20. Epub 2008 Jul 24. PMID:18653535

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (2pn6.pdb1.gz) 229 Kb LPC: Ligand-Protein Contacts for 2PN6 CSU: Contacts of Structural Units for 2PN6 Likely Quarternary Molecular Structure file(s) for 2PN6 Structure Factors (291 Kb) Retrieve 2PN6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2PN6 from S2C, [Save to disk] Re-refined 2pn6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2PN6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2PN6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2PN6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2pn6_A] [2pn6] SWISS-PROT database: [Q972W6] Domain organization of [Q972W6_SULTO] by SWISSPFAM Domain found in 2PN6: [HTH_ASNC ] by SMART

Other resources with information on 2PN6

Community annotation for 2PN6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---