2Q24 Transcription date May 25, 2007
title Crystal Structure Of Tetr Transcriptional Regulator Sco0520 Streptomyces Coelicolor
authors M.Cymborowski, M.Chruszcz, K.D.Koclega, E.V.Filippova, X.Xu, J.Gu A.Savchenko, A.M.Edwards, A.Joachimiak, W.Minor, Midwest Center Structural Genomics (Mcsg)
compound source
Molecule: Putative Tetr Family Transcriptional Regulator
Chain: A, B
Engineered: Yes
Organism_scientific: Streptomyces Coelicolor A3(2)
Organism_taxid: 100226
Strain: A3(2), M145
Atcc: Baa-471
Gene: Sco0520, Scf6.16
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Star Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P15tv Lic
symmetry Space Group: P 21 21 2
R_factor 0.191 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.295 146.152 47.305 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACT, CL, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of a putative transcriptional regulator SCO0520 from Streptomyces coelicolor A3(2) reveals an unusual dimer among TetR family proteins., Filippova EV, Chruszcz M, Cymborowski M, Gu J, Savchenko A, Edwards A, Minor W, J Struct Funct Genomics. 2011 May 29. PMID:21625866
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (2q24.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (2q24.pdb2.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 2Q24
  • CSU: Contacts of Structural Units for 2Q24
  • Likely Quarternary Molecular Structure file(s) for 2Q24
  • Structure Factors (493 Kb)
  • Retrieve 2Q24 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q24 from S2C, [Save to disk]
  • Re-refined 2q24 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Q24 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Q24
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Q24, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q24_A] [2q24_B] [2q24]
  • SWISS-PROT database: [Q9RJL5]
  • Domain organization of [Q9RJL5_STRCO] by SWISSPFAM
  • Other resources with information on 2Q24
  • Community annotation for 2Q24 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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