2Q53 Structural Genomics, Unknown Function date May 31, 2007
title Ensemble Refinement Of The Crystal Structure Of Uncharacteri Protein Loc79017 From Homo Sapiens
authors E.J.Levin, D.A.Kondrashov, G.E.Wesenberg, G.N.Phillips Jr., Cent Eukaryotic Structural Genomics (Cesg)
compound source
Molecule: Uncharacterized Protein C7orf24
Chain: A, B
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: C7orf24
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl834(De3) Prare2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pvp30
symmetry Space Group: P 21 21 21
R_factor 0.189 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.052 100.138 102.498 90.00 90.00 90.00
method X-Ray Diffraction, 4 Modelsresolution 2.01 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of Homo sapiens protein LOC79017., Bae E, Bingman CA, Aceti DJ, Phillips GN Jr, Proteins. 2008 Feb 1;70(2):588-91. PMID:17932939
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (227 Kb) [Save to disk]
  • Biological Unit Coordinates (2q53.pdb1.gz) 30 Kb
  • Biological Unit Coordinates (2q53.pdb2.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 2Q53
  • CSU: Contacts of Structural Units for 2Q53
  • Likely Quarternary Molecular Structure file(s) for 2Q53
  • Structure Factors (590 Kb)
  • Retrieve 2Q53 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q53 from S2C, [Save to disk]
    • View 2Q53 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2Q53
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Q53, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q53_A] [2q53] [2q53_B]
  • SWISS-PROT database: [O75223]
  • Domain organization of [GGCT_HUMAN] by SWISSPFAM
    • Other resources with information on 2Q53
  • Community annotation for 2Q53 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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